The Calvin cycleEdexcel A-Level Biology A: Revision notes
Section 1
The light-independent reactions
The light-independent reactions make carbohydrate from carbon dioxide. They take place in the stroma of the chloroplast, in a cycle of reactions called the Calvin cycle.
They do not use light directly, but they depend on the products of the light-dependent reactions: ATP supplies the energy and reduced NADP supplies the hydrogen (electrons and protons) to reduce carbon dioxide. Because the supply of ATP and reduced NADP stops soon after the light goes off, the Calvin cycle also stops soon after the light is switched off.
The cycle involves three stages: carbon fixation, reduction of GP to GALP, and regeneration of RuBP.
Section 2
Carbon fixation: rubisco and RuBP
In carbon fixation, carbon dioxide diffuses into the stroma and combines with the 5-carbon acceptor molecule ribulose bisphosphate (RuBP). The reaction is catalysed by the enzyme rubisco (ribulose bisphosphate carboxylase), which is the most abundant enzyme in leaves.
The product is an unstable 6-carbon compound that immediately splits into two molecules of glycerate 3-phosphate (GP), each with 3 carbons:
CO₂ + RuBP (5C) → 2 GP (3C)
Carbon dioxide has been "fixed", converted from an inorganic gas into an organic compound.
The 6-carbon compound is unstable and splits immediately, so the first stable product is GP. Do not say that one molecule of GP is formed from each carbon dioxide: two are formed.
Section 3
Reduction of GP to GALP
GP is converted to glyceraldehyde 3-phosphate (GALP), also called triose phosphate, in a reduction reaction:
- Reduced NADP donates the hydrogen (and is oxidised back to NADP).
- ATP supplies energy (and is hydrolysed to ADP + Pi).
GALP is a 3-carbon sugar and is the first carbohydrate made. The NADP, ADP and Pi return to the thylakoid membranes, where they are reused in the light-dependent reactions.
Section 4
Regenerating RuBP and making sugars
For the cycle to continue, RuBP has to be regenerated. Five out of every six GALP molecules are used to remake RuBP, in a series of reactions that also uses ATP. The remaining GALP (one in six) leaves the cycle and is used to make glucose and other organic molecules.
Worked example: fixing six CO₂ gives 12 GP, then 12 GALP. Ten GALP (30 carbons) regenerate six RuBP (30 carbons); two GALP (6 carbons) form one hexose. If each GP reduced uses 1 ATP and 1 reduced NADP and each RuBP regenerated uses 1 ATP, the total is 12 + 6 = 18 ATP and 12 reduced NADP for one hexose.
Check carbon atoms in calculations: 6 CO₂ + 6 RuBP = 6 + 30 = 36 carbons = 12 GP × 3.
Section 5
Uses of the products of the Calvin cycle
GALP and the sugars made from it are used by plants, and by the animals and other organisms that feed on them, in:
- Respiration: glucose is oxidised to release energy for making ATP.
- Polysaccharides: glucose is joined by condensation reactions to make starch (storage), cellulose (cell walls) and, in animals, glycogen.
- Lipids: glycerol is made from GALP and fatty acids from intermediates of respiration.
- Amino acids: sugars provide the carbon skeletons; the nitrogen comes from nitrate in plants and from proteins in the diet of animals.
- Nucleic acids: sugars provide the pentose sugars (ribose, deoxyribose); nitrogen for the bases and phosphate are also needed.
Animals cannot fix carbon dioxide, so they get all of these from the food they eat.
Section 6
Evidence and effects of limiting factors
Using radioactive ¹⁴CO₂ and the "lollipop" apparatus, Calvin showed that GP was the first compound to be labelled, followed by GALP and then sugars.
The cycle can be investigated by changing one factor:
- Light off: no ATP or reduced NADP, so GP rises and RuBP falls.
- Carbon dioxide removed: RuBP is not used, so RuBP rises and GP falls.
Raising the carbon dioxide concentration increases the rate of fixation until another factor, such as light, temperature or the amount of rubisco, becomes limiting.
That's the notes covered.
Carry on to the next subtopic.
Exam questions on The Calvin cycle
- In the 1950s Melvin Calvin and his team supplied the green alga Chlorella with carbon dioxide containing radioactive carbon-14, in bright light. After a measured time, samples of the algae were dropped into hot ethanol. The compounds in each sample were separated by chromatography and the radioactive ones were identified. After 5 seconds nearly all the radioactivity was in one compound, but after 30 seconds it was found in many compounds.Suggest why, after 30 seconds, the radioactive carbon was found in many different compounds.2 marks
- A suspension of Chlorella is kept in bright light with a constant supply of carbon dioxide, and the concentrations of GP and RuBP inside the cells stay steady. The light is then switched off, while the carbon dioxide supply continues unchanged, and the concentrations of GP and RuBP are measured over the next minute.Explain the changes in the concentrations of GP and RuBP after the light is switched off.2 marks
- A tomato grower raises the carbon dioxide concentration in a greenhouse from 0.04% to 0.1%, in bright light at 25 °C. In the Calvin cycle in the leaf cells, each molecule of GP is reduced to one molecule of GALP using one molecule of ATP and one molecule of reduced NADP, and the regeneration of each molecule of RuBP from GALP uses one molecule of ATP.Explain how the increase in carbon dioxide concentration affects the concentrations of GP and RuBP in the leaf cells, and why the rate of carbon fixation does not keep on increasing as carbon dioxide is added.3 marks
Written by the Exaim team, led by Shaun Daswani (Head of Upper Secondary, Improve ME Institute; MSc Financial Mathematics, Imperial College London; BSc, UCL) and Jason Daswani (operational lead, Improve ME Institute; LSE).